Biology

University of Hawaii researchers studied an area of the Pacific Ocean called the “twilight zone,” about 650-5,000 feet (200-1,500 meters) below sea level. Their peer-reviewed findings, published Thursday in the Nature Communications scientific journal, say mining waste could affect anything from tiny shrimp smaller than .08 inches (2 millimeters) long to fish 2 inches (5 centimeters) long.

ITIS Tree of Life

It’s a universal fact that as any 3D object, from a Platonic sphere to a cell to an elephant, grows outward in all directions, its total surface area will increase more slowly than the space it occupies (its volume). If the object’s geometry and shape remain the same as it gets bigger, then its surface area will increase roughly as fast as its volume to the two-thirds power. For centuries, biologists have wondered if life forms, too, follow this two-thirds scaling law, even though they come in a stunning variety of shapes and sizes. If so, it would suggest that there are underlying constraints fundamental to evolution that might influence how life interacts with the world around it.

Researchers don’t know exactly how psilocybin, a psychoactive compound found in psychedelic mushrooms, evolved. Now, a new study adds to the mystery: Its findings reveal that two different groups of fungi came up with independent ways to produce the seemingly magical molecule.

Some scientists looking to preserve vulnerable species have turned to a controversial technique: synthetic biology. This catchall term often means genetic engineering – introducing new genes to an organism. And a recent narrow vote by the International Union for Conservation of Nature on using the technology shows how divided scientists are on the issue of releasing genetically altered species. Science correspondent Nate Rott wades into the debate with us and reveals whether or not the Union voted to place a moratorium on releasing gene-edited species.

Creature, known as the seven-arm octopus, has been historically found in Atlantic waters: biologist

Bonkers preprint, the guys generated phage genomes with AI, synthesized them, and some were actually functional viruses capable of infecting E. coli.

The title is a bit clickbait, but it was an interesting read nontheless

To trap its prey, the Venus flytrap sends rapid electrical impulses, which are generated in response to touch or stress. But the molecular identity of the touch sensor has remained unclear. Japanese scientists have identified the molecular mechanism that triggers that response and have published their work in a new paper in the journal Nature Communications.

I’m looking forward to the end of that copy pasta

In 2014, University of California, Berkeley biologist Robert Dudley wrote a book called The Drunken Monkey: Why We Drink and Abuse Alcohol. His controversial “drunken monkey hypothesis” proposed that the human attraction to alcohol goes back about 18 million years, to the origin of the great apes, and that social communication and sharing food evolved to better identify the presence of fruit from a distance. At the time, skeptical scientists insisted that this was unlikely because chimpanzees and other primates just don’t eat fermented fruit or nectar.

The spiders in question are Stegodyphus dumicola aka African social spiders.

I saw this older article in the sidebar while reading that other recent ant article. I thought it was also neat and worth a separate post.

Lots of people are excited about the idea of using plants to help us draw down some of the excess carbon dioxide we've been pumping into the atmosphere. It would be nice to think that we could reforest our way out of the mess we're creating, but recent studies have indicated there's simply not enough productive land for this to work out.

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Abstract An important model system for studying the role of genetic diversity and hybridization in plant invasions is the species complex of the genus Reynoutria Houtt. Within the secondary distribution range, two species of this genus are widespread, R. japonica Houtt. and R. sachalinensis (F. Schmidt) Nakai, as well as their derivatives, the hexaploid R. × bohemica Chrtek & Chrtková and the tetraploid R. × moravica (Hodálová and Mereďa) Olshanskyi and Antonenko, which are recognized as separate species. The genetic diversity of the species of the genus Reynoutria in Ukraine is still almost unexplored by molecular methods. In this work, we determined chloroplast haplotypes for samples of R. japonica, R. sachalinensis and R. × bohemica from Ukraine and other European countries and compared them with haplotypes of Reynoutria from the primary distribution range in China and Korea. The genetic diversity of R. japonica from the primary distribution range was significantly higher compared to European samples, which are mainly represented by the haplotype J1.1. At the same time, we identified haplotypes J1.2 and J1.3 specific to the Eastern European area, which probably arose as a consequence of the divergence of the chloroplast genome within the secondary distribution range. Of the five samples morphologically identified as R. × bohemica, three carry the haplotype J1.1, which is consistent with the idea that R. japonica var. japonica was involved as a maternal form in the formation of R. × bohemica. However, a chloroplast haplotype identical to R. sachalinensis was detected in two samples from the Alpine region of Europe. These samples likely represent another hybrid species of R. × moravica. Therefore, the use of chloroplast DNA markers is crucial for identifying the donor of maternal subgenomes in hybrid forms of the genus Reynoutria.

Youtube link

Abstract In this research the involvement of autophagy in the development of microsporogenesis in shepherd’s purse (Capsella bursa-pastoris) as a representative of dicotyledons and in Siebold’s plantain lily (Hosta sieboldiana) and Virginia spiderwort (Tradescantia virginiana) as representatives of monocotyledons was investigated. It was shown that microsporogenesis in the studied species is accompanied by the activation of autophagy, which is associated with both the onset and completion of meiosis and corresponds to the accumulation and degradation of regulators involved in meiotic division and tapetogenesis. The presence of cytomixis in meiosis prophase may serve as additional confirmation of the regulatory role of autophagy in meiosis. It was confirmed that autophagy is involved in the functioning and degradation of the tapetum. The activation of autophagy may accompany the formation of tetrads of microspores (C. bursa-pastoris), the functioning and degradation of the tapetum (H. sieboldiana), as well as the formation of tetrads and the final degradation of the tapetum (T. virginiana). This may be because the studied species differ in the type of tapetum (secretory and plasmodial). This difference between tapetum types is not clearly diagnosed, and varieties are differentiated in terms of reorganization, intensity of autophagy, and time of degradation of the tapetum tissue within the secretory type. The obtained results allow for the conclusion that, in general, the functioning and degradation of the tapetum in the studied monocots are accompanied by more intense autophagy than in the representative of dicot.

Yet over the past 66 million years, mammals across the globe have repeatedly gone down this path—not once or twice, but at least a dozen times. From anteaters and aardvarks to pangolins and aardwolves, the so-called myrmecophages (animals that feed on ants and termites) have evolved similar traits: they’ve lost most or all of their teeth, grown long sticky tongues, and learned to consume insects by the tens to hundreds of thousands each day.

Scientists at the University of British Columbia have discovered a previously unknown virus in farmed Pacific oysters during a mass die-off in B.C. in 2020.

Just found this artist through credit on a PBS Eons video and had to share.

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Date: July 6, 2025

Frogs, salamanders, and other amphibians around the world face mounting threats from a devastating fungus, climate change, habitat loss -- and road mortality. Among these, roads pose a uniquely immediate danger by cutting through critical migration corridors, allowing vehicles to crush millions of animals each year.